Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKHSSDFVVIKAVEDGVNVIGLTRGTDTKFHHSEKLDKGEVIIAQFTEHTSAIKVRGEALIQTAYGEMKSEKK
1WAP Chain:C ((8-74))-------DFVVIKAVEDGVNVIGLTRGTDTKFHHSEKLDKGEVIIAQFTEHTSAIKVRGEALIQTAYGEMKSEK-


General information:
TITO was launched using:
RESULT:

Template: 1WAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 277 -20474 -73.91 -305.58
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain C : 0.97

3D Compatibility (PKB) : -73.91
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.97
QMean score : 0.688

(partial model without unconserved sides chains):
PDB file : Tito_1WAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WAP-query.scw
PDB file : Tito_Scwrl_1WAP.pdb: