Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSMHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSWNHQVFPIDTDTIRAQLATITDGIGVDAMKTGMLPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKGAEVKEAIYAAKEFITAAIKE--SFPLNQYVGPTKHSALRLNQQS
1JXI Chain:B ((23-283))MQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVA--ENTCGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHARTEQEMLAQGRALLAMGCEAVLMK-G---------DWLFTREGEQRF---RVNTKNTHGTGCTLSAALAALRPRHRSWGETVNEAKAWLSAALAQADTLEVGKGIGPVHH---------


General information:
TITO was launched using:
RESULT:

Template: 1JXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1437 -127250 -88.55 -515.18
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -88.55
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_1JXI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JXI-query.scw
PDB file : Tito_Scwrl_1JXI.pdb: