Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVLTARRRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGRAGIAVHAALSRLGRPYVWGATGPNQFDCSGLVQWAYAQ-AGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPH----PGHVQLAIGNNLVVEAPHAGASVRVSSLGNNVQIRRPLSGR |
2K1G Chain:A ((40-147)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTS-SGVIISSMNEPY--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2K1G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -43568 for 713 contacts (-61.1/contact) +
2D Compatibility (PS) -11326 + (NN) -3936 + (LL) 12992
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -54388.0 ( -76.28 by residue)
QMean score : 0.491
|
|
|