Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQAGSSVAVIQERQALLARQHDAVAEADRE----LADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQTFLVAKQREIVAVVAAAHELDRAKSAVLKRLRAQYTEPAR
2MN2 Chain:A ((1-122))
MDEYSPKRHDVAQLKFLCESLYDEGIATLGDSHHGWVNDPTSAVNLQLNDLIEHIASFVMSFKIKYPDDGDLSELVEEYLDDTYTLFSSYGINDPELQRWQKTKERLFRLFSGEYISTLMKT--
General information:
TITO was launched using:
RESULT:
Template:
2MN2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1543 for 870 contacts (1.8/contact) +
2D Compatibility (PS) -12857 + (NN) -7518 + (LL) 244
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -20738.0 ( -23.84 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_2MN2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MN2-query.scw
PDB file :
Tito_Scwrl_2MN2.pdb
: