Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADPGPFVADLRA-ESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAV-TDEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLAWFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIAQAFAGPPGRGR |
| 2HKV Chain:A ((2-136)) | MTDWQQALDRHVGVGVRTTRDLIRLIQPEDWDKRPISGKRSVYEVAVHLAVLLE-ADLRIATGATADE---------MAQF------YAVPVLPEQLVDRLDQSWQYYQDRLMAD-FSTETTYWGVTDSTTGWLLEAAVHLYHHRSQLLDYL----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38072 for 906 contacts (-42.0/contact) +
2D Compatibility (PS) -13794 + (NN) -5385 + (LL) 7524
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -54727.0 ( -60.41 by residue)
QMean score : 0.312
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