Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPVILVAGQDHT--DEVTGALLR-R----TGTVVVEHRFDG-HVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRLHRRDNVGRIVVHLAPWLEPQ-PICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQAEFADLLVLTHPEPVAVAVLRRLAPRARITGGVDRVELALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR |
| 1LS1 Chain:A ((98-254)) | --RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGE----KVGVPVLEVMDGES----PESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELAR-------------LKEVLGPDEVLLVLDAMTGQEALSV----------ARAFD-EKVGVTGLVLTKLD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107491 for 1112 contacts (-96.7/contact) +
2D Compatibility (PS) -15784 + (NN) -7031 + (LL) 14992
1D Compatibility (HY) -800 + (ID) 950
Total energy: -117064.0 ( -105.27 by residue)
QMean score : 0.322
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