Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPFDDPQAELAWMFLQSLCEGGDLDEGFALLSNDFTYWSIVT----RTELDKK-TFRRAVERRKQVF-EVNIELIRCVNEGETVVVEGHCDGVS-ADRTRYDSPFVCIFETRDGMIISLREYSDTQSLAEVYPVACATPGRC
3EC9 Chain:A ((11-140))
----MRTPYQIVADHYAASDR-HDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFKLDALHDAGDTVIGVGRYSGTYRRTGKSFECRVAHVWRVDAGKIVHFEQFTDTLLVAQAMQP--------
General information:
TITO was launched using:
RESULT:
Template:
3EC9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42065 for 842 contacts (-50.0/contact) +
2D Compatibility (PS) -13520 + (NN) -6536 + (LL) 320
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -65401.0 ( -77.67 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_3EC9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EC9-query.scw
PDB file :
Tito_Scwrl_3EC9.pdb
: