Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLAAEPHPAPPQQPTVAWSEPDVDRRVEFWPTVAIRSALESGDIATWQRIAAALKRDPYGRTARQVEEVLEGIPATGIANAFWEVLDRARTHLDAN-E-RAEVARQVGLLLDRSGLQRQEFASRIGVTAQDLTAY-LDGIVSPSASLMIR-MRRLSDRFVRAKSVRAADS
2A6C Chain:A ((6-81))
------------------------------------------------------------------------------------------IHHHHHHMKMRSQLLIVLQEHLRNSGLTQFKAAELLGVTQPRVSDLMRGKIDLFSLESLIDMITSIGLKVEINIKD-----
General information:
TITO was launched using:
RESULT:
Template:
2A6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25446 for 400 contacts (-63.6/contact) +
2D Compatibility (PS) -8033 + (NN) -4731 + (LL) 6916
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -33944.0 ( -84.86 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_2A6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A6C-query.scw
PDB file :
Tito_Scwrl_2A6C.pdb
: