Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRTRSGSLAAGGLNWASL----PLKLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQP-FMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED----LHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADD-----ANWTVFETRMNELIPLALRLIEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPVAEIDVDYSPAQLEDTFADEDRRTLAAASA |
| 3MJO Chain:A ((12-283)) | -------TDPVKAINWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAET---MHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSE-ENENLQ----RKAKIIMSYYNGD-DP---LKK-KVASTLLESFLFYSGFYLPMYL-SSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYD--D--L--GWT-EDVKRFLRYNANKALNNLGYEGLFPTD---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104987 for 2078 contacts (-50.5/contact) +
2D Compatibility (PS) -27170 + (NN) -8329 + (LL) 3476
1D Compatibility (HY) -12800 + (ID) 1950
Total energy: -151760.0 ( -73.03 by residue)
QMean score : 0.396
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