Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MR--------------ILVTGGVRSGKSTHAEALLGDAAD-----VVYVAPGRPAAGSDPDWDAR-----VALHRARRPPTWLTVETADVA--------TALSEARSP---VLVDCLGTWLTAIMDGEALWSAAT-----ADVYAVLEARLDGLCAALTGLPTAIVVTNEVGLGVVPSHSSGVLFRDLLGTINRRVAAVCDEVHLVIAGRVLKL---------------------------------------------- |
1YRB Chain:A ((1-259)) | MRGSHHHHHHGMASMIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMREGYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQ-METFLFHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLETLAYEHYCTCG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82831 for 1212 contacts (-68.3/contact) +
2D Compatibility (PS) -18992 + (NN) -9625 + (LL) 156
1D Compatibility (HY) -2800 + (ID) 1600
Total energy: -115692.0 ( -95.46 by residue)
QMean score : 0.222
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