Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRD-FRVLDTEPADGDGG
4EXR Chain:A ((115-173))
--------------------------------------TPQQAMEIALKEQN-GIVKEWSLDKDLDVTFYKIRIDK-DKNEYDIKVDSKKGTVLKVEKE-----
General information:
TITO was launched using:
RESULT:
Template:
4EXR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18692 for 379 contacts (-49.3/contact) +
2D Compatibility (PS) -6644 + (NN) -5747 + (LL) 1220
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -33163.0 ( -87.50 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_4EXR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EXR-query.scw
PDB file :
Tito_Scwrl_4EXR.pdb
: