Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPERQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQRTGEDD
2HGK Chain:A ((1-117))
---------MTTHDRVRLQLQALEALLREHQH---------------WRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNK------------------QPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDASLEHHHHHH------
General information:
TITO was launched using:
RESULT:
Template:
2HGK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26992 for 724 contacts (-37.3/contact) +
2D Compatibility (PS) -12421 + (NN) -348 + (LL) 2908
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -40053.0 ( -55.32 by residue)
QMean score : 0.269
(partial model without unconserved sides chains):
PDB file :
Tito_2HGK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HGK-query.scw
PDB file :
Tito_Scwrl_2HGK.pdb
: