Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVPAVSPQPILAPLTPAAIFLVATIGADGEATVHDALSKISGLVRAIGFRDPTKHLSVVVSIGSDAWDRLFAGPRPTELHPFVELTGPRHTAPATPGDLLFHIRAETMDVCFELAGRILKSMGDAVTVVDEVHGFRFFDNRDLLGFVDGTENPSGPIAIKATTIGDEDRNFAGSCYVHVQKYVHDMASWESLSVTEQERVIGRTKLDDIELDDNAKPANSHVALNVITDDDGTERKIVRHNMPFGEVGKGEYGTYFIGYSRTPTVTEQMLRNMFLGDPAGNTDRVLDFSTAVTGGLFFSPTIDFLDHPPPLPQAATPTLAAGSLSIGSLKGSPR |
| 5DE0 Chain:B ((7-293)) | ------SQTAILPEAGPFALYTLLKVRQN-HAHVLQALKALPALVEEINQNQPGAELTVSVAFSKGFWSH-FEMASPPELIDFPELGEGETHAPSTDVDVLIHCHATRHDLLFYTLRKGISDIAQDIEIVDETYGFRYLDARDMTGFIDGTENPKAEKRAEVALVADGD--FAGGSYVMVQRFVHNLPAWNRLNLAAQEKVIGRTKPDSVELEN--VPAASHVG-RVDIKEEGKGLKIVRHSLPYGSVS-GDHGLLFIAYCHTLHNFKTMLESMY-GVTDGKTDQLLRFTKAVTGAYFFAPS--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DE0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127086 for 2349 contacts (-54.1/contact) +
2D Compatibility (PS) -31504 + (NN) -22089 + (LL) 2052
1D Compatibility (HY) -23600 + (ID) 5550
Total energy: -207777.0 ( -88.45 by residue)
QMean score : 0.515
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