Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALDWRSALTADEQRSVRALVTATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPRGAGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASALGLVGVRELIQMRRPLRDIPEPTIPDGVVIRTY-AGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRL-GGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVDTAYALAGTDN |
| 4IUS Chain:A ((85-254)) | -----------------------------------------------------------------------------------------------------------------ANPGLAYVLVEHGMTIVSRPPLLAVEPGDLLVPEFPAGVTAAVVASAE-EQEAANAIAGDAYETD-------ASPFQPE----PA-DGGAVLIRM------DGVPVATAAWTAIA--DGVTEVAGVGTLHSHRRQGLGALATAYATQQAF-EVGG---------ATLAWLTP--GDDGADRIYRRLGYEPKATAVHLGDPG--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IUS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -88182 for 1288 contacts (-68.5/contact) +
2D Compatibility (PS) -17674 + (NN) -4977 + (LL) 7764
1D Compatibility (HY) 3200 + (ID) 1450
Total energy: -101319.0 ( -78.66 by residue)
QMean score : 0.383
|
|
|