Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDSDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSERDILRSAADLMLALVDESP
4MNU Chain:A ((4-140))
----MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICENQGIIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQNKNNKKNKLLFPTEKGQQLYPLIIRENEYSNAVALKGFTEAEINMLTDALKKVKENIAD--
General information:
TITO was launched using:
RESULT:
Template:
4MNU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44688 for 859 contacts (-52.0/contact) +
2D Compatibility (PS) -15301 + (NN) -10202 + (LL) 112
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -75029.0 ( -87.34 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_4MNU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MNU-query.scw
PDB file :
Tito_Scwrl_4MNU.pdb
: