Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGVSEAERRGHRKLVRFQARRAIGPIRPTSAAWDRDFDPAGKRIAVVGTDAAAAHYISRLSESAASVTVFTQAPRRVVTGVPL-------WTTRAKRWLRRRTGAE-------------HPAVAWATAAIDALTSSGIRTSDGVEHPVDAIIYGTGFAIADQVGD-QTLVGAGGVTIRQAWDDGMEPYLGVAVHGFPNYFFITGPDTAAQARCVVECMKLMERTASRRIEVRRSSQQVFNERAQLKPAQPHRQTGGLEAFDLSSAATEDDQTYDGAATLTLAGARFRVRVRLTGHLDPIDGNYHWQGTVFDSLPETSLTHARAATLTIGGRSAPARITEQTPWGTHSVAGVGPPPYARSGPASATT |
| 4USQ Chain:A ((132-330)) | -VVISATGTWRNPFIPAYPGADLFQGAQLHSAHYQSPAPFAGQKVLVVGGGNSGAQILAEVSRV-ADCTWVTTSEPIFLPDDVDGRVLFQRATDRWKA---------DVVMVPPVKEARERGALHA-VRPFTRFTANGVVWADGTGSAVDAVIWCTGFRPALAHLQSLGVINPDGKV---------DLAG-TRSLQEPRLWLLGYG----------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4USQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64255 for 1123 contacts (-57.2/contact) +
2D Compatibility (PS) -17756 + (NN) -6959 + (LL) 11068
1D Compatibility (HY) -6000 + (ID) 1550
Total energy: -85452.0 ( -76.09 by residue)
QMean score : 0.390
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