Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGDRALIMAIVNRTPDSFYDKGATFS-DAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA |
4D8A Chain:A ((37-293)) | --------------------------------------NEKTLIMGILNVTPDSFSDGGSYNEVDAAVRHA-KEMRDEGAHIIDIG--------KVSVEEEIKRVVPMIQAVSKEVK-LPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM------------NYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153501 for 2096 contacts (-73.2/contact) +
2D Compatibility (PS) -27570 + (NN) -15667 + (LL) 1740
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -220748.0 ( -105.32 by residue)
QMean score : 0.464
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