Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGDRALIMAIVNRTPDSFYDKGATFS-DAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA
4D8A Chain:A ((37-293))--------------------------------------NEKTLIMGILNVTPDSFSDGGSYNEVDAAVRHA-KEMRDEGAHIIDIG--------KVSVEEEIKRVVPMIQAVSKEVK-LPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM------------NYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG------------


General information:
TITO was launched using:
RESULT:

Template: 4D8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153501 for 2096 contacts (-73.2/contact) +
2D Compatibility (PS) -27570 + (NN) -15667 + (LL) 1740
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -220748.0 ( -105.32 by residue)
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_4D8A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D8A-query.scw
PDB file : Tito_Scwrl_4D8A.pdb: