Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLGFTSGGV----------RLTRTKTRPYLGDL-GAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG |
1HG0 Chain:D ((83-315)) | ----------------------------------------------------------------------------------RDDVDGVVITHGTDTVEESAYFLHLTVKSDKPVVFVAAMRPATAISADGPMNLLEAVRVAGDKQSRGRGVMVVINDRIGSARYITKTNASTLDTFRANEEGYL--GVIIGNRIYYQNRIDKLHTTRSVFDVRGLTSLPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAGSVSVRGIAGMRKALEKG---VVVMRST-----RTGNGIVPPDE--ELPGLVSDSLNPAHARILLMLALTRTS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132317 for 1758 contacts (-75.3/contact) +
2D Compatibility (PS) -25331 + (NN) -22030 + (LL) 5536
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -194342.0 ( -110.55 by residue)
QMean score : 0.457
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