Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRAKAAPVAGPEVAANRAGRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDLEELGAVKLRGADGGTGIYVVPEDGSPVRGVSGGTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFENLR
3CAG Chain:B ((1-79))
-------------------------------------------------------------------------------------------GGTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFENLR
General information:
TITO was launched using:
RESULT:
Template:
3CAG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55079 for 581 contacts (-94.8/contact) +
2D Compatibility (PS) -8637 + (NN) -5303 + (LL) 6320
1D Compatibility (HY) -9600 + (ID) 3950
Total energy: -76249.0 ( -131.24 by residue)
QMean score : 0.717
(partial model without unconserved sides chains):
PDB file :
Tito_3CAG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CAG-query.scw
PDB file :
Tito_Scwrl_3CAG.pdb
: