Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTPGEDHAGSFYLPRLEYSTLPMAVDRGVGWKTLRDAGPVVFMNGWYYLTRREDVLAALRNPKVFSSRKALQPPGNPLPVVPLAF------DPPEHTRYRRILQPYFSPAALSKALPSLRRHTVAMIDAIAGRGE-CEAMADLANLFPFQLFLVLYGLPLEDRDRLIGWKDAVIAMSDRPHPTEADVAAARELLE-YLTAMVAERRRNPGPDVLSQV---QIGEDPLSEIEVLGLSHLLILAGLDTVTAAVGFSLLELARRPQLRAMLRDNPKQIRVFIEEIVRLEPSAPVAP-RVTTEPVTVGGMTLPAGSPVRLCMAAVNRDGSDAMSTDELVMDGKVHRHWGFGGGPHRCLGSHLARLELTLLVGEWLNQIPDFELAPDYAPEIRFPSKSFALK---NLPLRWS |
4MM0 Chain:B ((48-399)) | -----------------------------------------------FLVTRYEDVRFVLSDPR-FSVRQDL--PGAPR-LTEMTFESVMTTDPPVHTRLRRLLSRDFTARRIERMRPRLEEIAEGLLDEMEKKGAPADIVESLAVPFPITVICELLGVPMVDVARFRGWADTMVSLTGY---SMEDWTAARDALESYLDGLVAAKRENPGSDLLSALVATAAEDNELTDHDVRSLSLILLLAGYEPASNQLGSSVLTLLRFPDRLAELRRDPGLLPSAVEELMRYAPAGDGALFRVTLEDVTIGDTHIPANSAVLASTQAANWDPRRFDDPTGLRLDRPDNQHTALGHGIHFCLGAALARVELQVAIGALLRRFPRLALATDES-GLRWSSPGSMLSGFAEIPVTW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200740 for 2630 contacts (-76.3/contact) +
2D Compatibility (PS) -36934 + (NN) -31881 + (LL) 1784
1D Compatibility (HY) -22000 + (ID) 6000
Total energy: -295771.0 ( -112.46 by residue)
QMean score : 0.563
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