Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH
3COL Chain:A ((10-194))
---------------NKQVKIQDAVAAIILAEGPAGVSTTKVAKRVGIAQSNVYLYFKNKQALIDSVYARETNRILSTTDLDRLSDSTIDVTTRIRLYVQQVYDYSLANPDSLTIIQQIKALNGQ---------DADPNNIVANLLTAAIDAKVIK-------------------------QLPVSLHMGVVFSTIHTHTTNISKGRYAQD-----QYTFGDIFQMIWDAMK--
General information:
TITO was launched using:
RESULT:
Template:
3COL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100931 for 1293 contacts (-78.1/contact) +
2D Compatibility (PS) -19122 + (NN) -6356 + (LL) 2556
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -131653.0 ( -101.82 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_3COL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3COL-query.scw
PDB file :
Tito_Scwrl_3COL.pdb
: