Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTVLGLSITPTTLGWVLAEGHGADGAILDRNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLVESL-TGAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTHDGKT-Q-IAVKHVCRGL--S--------------------------------------------------------------------------------------GLTSWLTGMFGRD-----AWRPAGVVVVGSDSEVSEFSWQLERVLP--------VPVFAQTMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAPRRSRHYAGAAAALAAAAVTFVASLSLAVGIQLAPHNDTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPPVPARAPRPAAQHEPPARVTSGEALTEPNPPEEQPNASAPQQDRNDSQPITRVLEHIPGAYGDSAPPAE |
| 4PL7 Chain:A ((106-378)) | ----------------------------------------------------------------------TEAPMNPKSNR-E--KMTQIMFETFNVPAFYVSIQAVLSLYASG-------RTTGIVLDSGDGVTHVVPIYA--GFSLPHAILRIDLAGRDLTDYLMKILSERGYTFSTSAEREIVRDIKEKLCYVALDFDQELQTSSQSSSIEKSYELPDGQVITIGNERFRAPEALFHPSVLGLEASGIDQTTYNSIMKCDVDVRKELYSNIVMSGGTTMFPGIAERMQKELTALAPSSMKVKISAPPERKYSVWIGGSILASLG------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PL7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108439 for 1035 contacts (-104.8/contact) +
2D Compatibility (PS) -15642 + (NN) -5624 + (LL) 13572
1D Compatibility (HY) 400 + (ID) 700
Total energy: -116433.0 ( -112.50 by residue)
QMean score : 0.295
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