Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MVLSRTSTGRVILVPTQLRFDRWFLPLAVPLGLGPKNSELWVGA-GSLHVKMGWAFAADIPLTSITKAEATNARVYAAG----VHFGFGRWLVNGSRKGLVALTIDPPEQAKMWKKSMTVRELWVSVTDPDALVTACTAK
2HEW Chain:F ((12-139))
PPIQRLRGAVTRCEDGQLFISSYKNEYQ----------TMEVQNNSVVIKCDGLYIIYLKGSFFQEVKIDLHFREDHNPISIPMLNDGRRIVFTVVASLAFKD---KVYLTVNAP-DTLCEHLQINDGELIVVQLTP----GYCAP-
General information:
TITO was launched using:
RESULT:
Template:
2HEW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84790 for 812 contacts (-104.4/contact) +
2D Compatibility (PS) -13048 + (NN) -5268 + (LL) 1568
1D Compatibility (HY) -6400 + (ID) 800
Total energy: -108738.0 ( -133.91 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_2HEW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HEW-query.scw
PDB file :
Tito_Scwrl_2HEW.pdb
: