Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGVDPDKDVDIMVRDG--QLTIKAERTEQKDFDGRSEFAYGSFVRTVSLPVGADEDDIKATYDKGILTVSVAVSEGKPTEKHIQIRSTN
4RZK Chain:A ((80-164))
----------------------------------SEEREPLADVIEKGDEIKVVAEVPGVN-KEDIKVKVTNGGKKLVITAKSED------------RQYYKEIDLPAEVDEKAAKANFKNGVLEITLKKKA--------------
General information:
TITO was launched using:
RESULT:
Template:
4RZK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44019 for 559 contacts (-78.7/contact) +
2D Compatibility (PS) -9125 + (NN) -3284 + (LL) 3196
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -57932.0 ( -103.64 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_4RZK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RZK-query.scw
PDB file :
Tito_Scwrl_4RZK.pdb
: