Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQSLAVKTFEDLFAELGDRARTRPADSTTVAALDGGVHALGKKLLEEAGEVWLAAEHESNDALAEEISQLLYWTQVL-MISRGLSLDDVYRKL
1Y6X Chain:A ((7-93))
------VKTFEDLFAELGDRARTRPADSTTVAALDGGVHALGKKLLEEAGEVWLAAEHESNDALAEEISQLLYWTQVLMI-SRGLSLDDVYRKL
General information:
TITO was launched using:
RESULT:
Template:
1Y6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14471 for 500 contacts (-28.9/contact) +
2D Compatibility (PS) -9438 + (NN) -5696 + (LL) 944
1D Compatibility (HY) -7600 + (ID) 3650
Total energy: -39911.0 ( -79.82 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_1Y6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y6X-query.scw
PDB file :
Tito_Scwrl_1Y6X.pdb
: