Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIADEIQSGLACTGYPFACDHGGVLPDIYLLGKTLGGGAVPLSAMVADREIFGVVHPGEHGSTFGGNPLAAAIGTPVVSMVVWGECQARSAKLGAHLHQRLADLIGDGAVALRGLGWWADVDIERALAIGT-DMSMRLADRGVLLKDTYGAALRFAPPLVITAQEIDCAVRRFADALWEAGS
2BYL Chain:B ((260-430))
FIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIE-----------
General information:
TITO was launched using:
RESULT:
Template:
2BYL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88766 for 1130 contacts (-78.6/contact) +
2D Compatibility (PS) -18049 + (NN) -5453 + (LL) 824
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -128494.0 ( -113.71 by residue)
QMean score : 0.191
(partial model without unconserved sides chains):
PDB file :
Tito_2BYL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BYL-query.scw
PDB file :
Tito_Scwrl_2BYL.pdb
: