Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAVPEPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVA---DGKPADLVNFSVEPDIARLVKAGKVDK-D---WDAD-A----------TKGIPFG-SVVTFVVRAGNPK------NIRDWDDLLRPGI--EVITPSPLSSGSAKWNLLAPYAAKSDGGRNNQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATERAGKPVQHVTPP-QTFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQA-GF--RPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 4R75 Chain:A ((3-278)) | ------------------------------------------------------KGRLVIYCSAT-NVMCENAAKTFEQKY-DVKTSFIRN--GSGSTFAKIEAEKNNPQADVWYGGTLDPQSQAGELGLLEAYRSPNIDQIMPKFQDPAKVKGNLSSAVYIGILGFAVNTERLKKLGIEKIPQCWNDLTDPKLKGEIQIADPQSSGTAY-TAIATFAQL-W-G--EDKAFDYFKHL-HPNISQYTKSGITPARNAARGETTVGIGFLHDYALEKEQGAPLEMVVPCEGTGYELGGVSILKGARNLDNAKLFVDFALSKEGQETAWKKGQALQTLTNTTA----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R75.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66943 for 2127 contacts (-31.5/contact) +
2D Compatibility (PS) -27121 + (NN) -11748 + (LL) 5552
1D Compatibility (HY) -3600 + (ID) 2050
Total energy: -105910.0 ( -49.79 by residue)
QMean score : 0.455
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