Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQK-GRQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEHITSLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKCRLYCGACDAGARSTTSLAAGNGL
3HFJ Chain:B ((9-189))
IGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPY-----------PITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY--------------------
General information:
TITO was launched using:
RESULT:
Template:
3HFJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126610 for 1325 contacts (-95.6/contact) +
2D Compatibility (PS) -19468 + (NN) -8647 + (LL) 1324
1D Compatibility (HY) -15200 + (ID) 3700
Total energy: -172301.0 ( -130.04 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3HFJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HFJ-query.scw
PDB file :
Tito_Scwrl_3HFJ.pdb
: