Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSFVITNPEALTVAATEVRRIRDRAIQSDAQV----APMTTAVRPPAADLV-------------------SEKAATFLVEYARKYRQ-TIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS-------
1E79 Chain:H ((15-145))
QMSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRIEANEALVKAL
General information:
TITO was launched using:
RESULT:
Template:
1E79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28454 for 537 contacts (-53.0/contact) +
2D Compatibility (PS) -10325 + (NN) 651 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -40778.0 ( -75.94 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_1E79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E79-query.scw
PDB file :
Tito_Scwrl_1E79.pdb
: