Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKSFYDAVGGAKTFDAIVSRFYAQVAEDEVLRRVYPEDDLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLIERDAWLRCMHTAVASIDSETLDDEHRRELLDYLEMAAHSLVNSPF
2QRW Chain:D ((3-128))
--KSFYDAVGGAKTFDAIVSRFYAQVAEDEVLRRVYPEDDLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLIERDAFLRCMHTAVASIDSETLDDEHRRELLDYLEMAAHSLVNSPF
General information:
TITO was launched using:
RESULT:
Template:
2QRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69890 for 859 contacts (-81.4/contact) +
2D Compatibility (PS) -14155 + (NN) -13175 + (LL) 68
1D Compatibility (HY) -16800 + (ID) 6250
Total energy: -120202.0 ( -139.93 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_2QRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QRW-query.scw
PDB file :
Tito_Scwrl_2QRW.pdb
: