Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYR--ALRERYSMLAACFEPDVACEITLQPIRRYD-VDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLDPQ-AIQPVLVAASLLVAELG-DVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEH----GVPMTHFGVGTAELLGAMSEAVTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHSL |
| 4WSH Chain:A ((10-357)) | ----TALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAG-DFMSLCMNPELACEVTLQPLDRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGYVMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRVPVILFTKGGGLWLESMAEVG--------AEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPAAIRAEVARILAAY-----GKGTGHVFNLGHGITPEVDPAHAGAFFEAVHEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268177 for 3027 contacts (-88.6/contact) +
2D Compatibility (PS) -36536 + (NN) -14818 + (LL) 900
1D Compatibility (HY) -26400 + (ID) 6800
Total energy: -351831.0 ( -116.23 by residue)
QMean score : 0.547
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