Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV
1C0W Chain:B ((1-225))
-KDLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV--------APGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIRVGSEVEI-VDRDGHITLSHNG-KDVELLDDLAHTIRIEEL
General information:
TITO was launched using:
RESULT:
Template:
1C0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101595 for 1742 contacts (-58.3/contact) +
2D Compatibility (PS) -24406 + (NN) -15687 + (LL) -172
1D Compatibility (HY) -20000 + (ID) 6500
Total energy: -168360.0 ( -96.65 by residue)
QMean score : 0.780
(partial model without unconserved sides chains):
PDB file :
Tito_1C0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C0W-query.scw
PDB file :
Tito_Scwrl_1C0W.pdb
: