Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVGTLVASVLPATVFEDLAYAELYSDPPGLTPLPEEAPLIARS-VAKRRNEFITVRHCARIALDQL-G---VP--PAPILKGDKGEPCWPD---GMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLPNGVLDAISLPAERADMPRTMPAALHWDRILFCAKEATYKAWFPLTKRWLGFEDAHITFETDSTGWTGRFVSRILIDGSTLSGPPLTTLRGRWSVERGLVLTAIVL |
| 5CXD Chain:A ((30-117)) | -----------------------------ERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTGHVAFNDIDCYNDELGKPKIDYEGFIVHVSISHTEHYAMSQVVL--------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22964 for 458 contacts (-50.1/contact) +
2D Compatibility (PS) -8443 + (NN) -3902 + (LL) 10288
1D Compatibility (HY) 0 + (ID) 700
Total energy: -25721.0 ( -56.16 by residue)
QMean score : 0.303
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