Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
2XZW Chain:D ((1-112))
MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKG----------TVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI
General information:
TITO was launched using:
RESULT:
Template:
2XZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63273 for 655 contacts (-96.6/contact) +
2D Compatibility (PS) -11359 + (NN) -3660 + (LL) 752
1D Compatibility (HY) -12800 + (ID) 3050
Total energy: -93390.0 ( -142.58 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_2XZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XZW-query.scw
PDB file :
Tito_Scwrl_2XZW.pdb
: