Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKSKRPPRFDLKSADGSFGRLVQIGGTTIVVVFAVVLVFYIVTSRDDKKDGVAGPGDAVRVTSSKLVTQPGTSNPKAVVSFYEDFLCPACGIFERGFGPTVSKLVD--IGAVAADYTMVAILDSA-----------------------------------SNQHYSSRAAAAAYCVADESIEAFRRFHAALFSKDIQPAELGKDFPDNARLIELAREAGVV-GKVPDCINSGKYIEKVDG---LAAAVNVHATPTVRV--NGTEYE---WS-TPAALVAKIKEIVGDVPGIDSAAATATS |
| 3KZQ Chain:A ((2-204)) | -----------------------------------------------------------------------------NIKLYYVHDPMCSWCWGYK----PTIEKLKQQLPGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFWKLCTPVRSTYQSCRAVIAAGFQ--DSYEQMLEAIQH--AYYLRAM-PPHEEATHLQLAKEIGLNVQQFKNDMDGTLLEGVFQDQLSLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERIIE------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KZQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101860 for 1128 contacts (-90.3/contact) +
2D Compatibility (PS) -16906 + (NN) -3859 + (LL) 4468
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -124107.0 ( -110.02 by residue)
QMean score : 0.446
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