Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGG-A---APEVTVESGVDSTGMSSETIILTARWQQD-GRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVE---G------IGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDF------QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLA----TLPGLPEVMREDDVRATYQALTGVE----------------LGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
| 4DA5 Chain:A ((82-429)) | -----------------QPEPRTRRRAYLWCKEFLPGAWRGLREDEFHIS--VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLY----------AEAMVLESVMFAILAER-SL-GPKLYGIFP-------QGRLEQFIPSRRLDTEE-----------L---SLPDISAEIAEKMATFHGMKMPFNKEPK---------WLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLEST--PSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAK-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -178679 for 2028 contacts (-88.1/contact) +
2D Compatibility (PS) -29579 + (NN) -6565 + (LL) 4324
1D Compatibility (HY) -10000 + (ID) 2000
Total energy: -222499.0 ( -109.71 by residue)
QMean score : 0.335
|
|
|