Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTD--ECVAVRAIRRLQMSC--LDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAALPDAVRSPDLIALSQLICRREC |
| 4LFE Chain:B ((65-279)) | ----------------------------------------------------------------------------------------------AAALEMIHTGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDSLFLDAFGMLAE-TDFPTDVTVDLVRSLSSASGTFGMVGGQMLDMAAEGK-KLNLKNLQLIHRHKTGQLLAYPFWAAARVAQLDENLLATFLEIGMIIGLAFQVRDDILDITANFEEIGKTPKKDVMAEKMTYPHLLGLNESYQILDE--SLDQAEAILRKLSDEIAFAPQKI------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84646 for 1566 contacts (-54.1/contact) +
2D Compatibility (PS) -22334 + (NN) -13856 + (LL) 9376
1D Compatibility (HY) -8800 + (ID) 3400
Total energy: -123660.0 ( -78.97 by residue)
QMean score : 0.280
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