Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSKAKVAIVG-SGNISTDLLYKLLRSEWLEPRWMVGIDPESDGLARAAKLGL-----------ETTHEGVDWLLAQPDKPDLVFEATSAYVHRDAAPKYAEAGIRAIDLTPAAV----GPAVIPPANLREHLD-----A---PNVNMITCGGQATIPIVYAVSRIV---EVPYAEIVASVASVSAGPGTRANIDEFTKTTARGVQTIGGAARGKAIIILNPADPPMIMRDTIFCAIPTDADREAIAASIHDVVKEVQTYVPGYRLLNEPQFDEPSINSGGQALVTTFVEVEGAGDYLPPYAGNLDIMTAAATKVGEEIAKETLVVGGAR |
| 4DPL Chain:A ((6-186)) | --RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSV-GK-PYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M-DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAG----------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54884 for 1074 contacts (-51.1/contact) +
2D Compatibility (PS) -16248 + (NN) -3361 + (LL) 8812
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -69381.0 ( -64.60 by residue)
QMean score : 0.325
|
|
|