Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQNWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVLKRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVG-QMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYPGTIQVVIGPAMHAEGEGPRAIAELNQRAEAWV--SETMAEISPIQQRVSHPEPSVVS |
| 1VSR Chain:A ((3-136)) | ----------------------------------------------------------------------------------------------------------------AIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGW-------RVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21745 for 910 contacts (-23.9/contact) +
2D Compatibility (PS) -14127 + (NN) -3363 + (LL) 11076
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -34209.0 ( -37.59 by residue)
QMean score : 0.077
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