Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
1G27 Chain:C ((1-164))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL--
General information:
TITO was launched using:
RESULT:
Template:
1G27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67790 for 1272 contacts (-53.3/contact) +
2D Compatibility (PS) -17664 + (NN) -6268 + (LL) 592
1D Compatibility (HY) -18800 + (ID) 4650
Total energy: -114580.0 ( -90.08 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_1G27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G27-query.scw
PDB file :
Tito_Scwrl_1G27.pdb
: