Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRYCVFGNPIGHSKSPLIHR----LFAEQTGEALVYDAQLAPLDDFPGFARRFFEQG-KGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDGAGLLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLAERFADLGAVHGCGFAEVEGPFDLIVNGTSASLAGDVP---PLAQSVIEPGRTVCYDMMYAKEPTAFNRWAAERGAARTLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV |
| 3PHJ Chain:A ((3-260)) | LKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLES--HIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLV-LENDELVGYNTDALGFYLSLK--------YQNALILGAGGSAKA-LACELKKQGLQVSVLNRSSR-GLDFFQR---LGC--DCFMEPPKSAFDLIINATS-----ELPLNKEVLKGYFKEGK-LAYDLAYG-FLTPFLSLAKELKTPFQ-DGKDMLIYQAALSFEKFSASQIPYSKAFEVMRSVF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129315 for 2074 contacts (-62.4/contact) +
2D Compatibility (PS) -25955 + (NN) -9497 + (LL) 2344
1D Compatibility (HY) -18000 + (ID) 4450
Total energy: -184873.0 ( -89.14 by residue)
QMean score : 0.411
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