Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLPTCLLAATLFLGSASLYAEDPA-CARVRLADPGWSDIAVTNATAAFLLESLGYQVKIDT-LSVPIIYGGLRDGQVDAFLGGWMPAHQDYHDKFVASGQVERLGRNLDGTRFTLAVPRYVWDA-GVHRFEDL--AAQGQRFNR------KLYGIGSGAPANQSIQKMIDANQFGLGD-WKLVESSEQAMLAELGRAEKRQRWLVFLGWTPHPMNIR----HDLRYLEGGEQYFG-----------------DRGQVYTLARKGYAAQCPNPARLLANLRFDLDMENRLMSDALEGT---ATPASATRAWLKANPRVLEAWLQGVTSRDGGDALAAVRGQP |
| 1R9L Chain:A ((1-309)) | ---------------------ADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAA--YELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112521 for 2258 contacts (-49.8/contact) +
2D Compatibility (PS) -29730 + (NN) -13031 + (LL) 2232
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -163500.0 ( -72.41 by residue)
QMean score : 0.511
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