Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDRLTATRVFVEVIDSGSQTAAAERLDMSRAMVSRYLAELEEWVGARLLHRSTRRLSLTDAGAELLPQCREMLAVADAMQATGQTRRDSPRGTLRITSSLSFAQAWLTRAAAAFVERYPGTAIDLQVNSQVVNLVEERIDLALRIANQLDPNLIARRLGECRSVICAAPDYLRRHGTPRRPEDLALHNCLTYSYF-GRSLWQFERDGEPTSVPVGGSLSANESTVLLEAAAAGAGISQQPLYSAAPLIRSGRLVALLPEWS-PQVLGIHAVYASRRQMPPALRALLDFLVERMAADPHWDEAGPLALA |
3HHF Chain:B ((5-208)) | -----------------------------------------------------------------------------------------PQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAG--DDSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQ-GNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144792 for 1554 contacts (-93.2/contact) +
2D Compatibility (PS) -21468 + (NN) -11321 + (LL) 8748
1D Compatibility (HY) -14000 + (ID) 3200
Total energy: -186033.0 ( -119.71 by residue)
QMean score : 0.439
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