Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHA-YWDLSPGIDFETRLIAKSNVASALEQELSKPGYRCAPINLGANTDPYQPLERERRLTRQVLEVLLRFRHPLTIVTKGSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLSGNGIPVGVLCSPMIPMVNDME----LERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAAHYP--QRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF |
| 1QOY Chain:A ((-4-298)) | SMAEIVADKTVEVVKNAIET-ADGALDLYNKYLDQVIPWQTFDETIKELSR------------FKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLFD-----------------------EYNEKKASAQKDILIK------VLDDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFSEKSSYFQSQVDKIRKEAYAGAAAGVVVGPFGLIISYSIAAGVVEGKLIPELKNKLKSVQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTRFYVDYDDLMLSLLKEAAKKMINTCNEYQKRHG-------------------KKTLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21835 for 2144 contacts (-10.2/contact) +
2D Compatibility (PS) -30327 + (NN) -43 + (LL) 1996
1D Compatibility (HY) 10800 + (ID) 800
Total energy: -40209.0 ( -18.75 by residue)
QMean score : 0.232
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