Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MSQPSENRLITSARYALCLLTASGVLLS---------GCASSGVGSVAQTTRA-----EYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASD------ENRGRNAALAAAGGALAGGAAGYYMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKALLDGRKNKSINEAEGRKRLAEI--------------VSGLQETNALLVAANGRAGENISNYTQAYEKDLQQVGVPRAEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKVA--SQGQGMIREVCNSPDMGDWAPPSCAKA----------------------------------------------------------------- |
| 3QE7 Chain:A ((4-410)) | RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRD--PGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMI-PLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 98644 for 2414 contacts (40.9/contact) +
2D Compatibility (PS) -30689 + (NN) 4216 + (LL) 76
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: 59047.0 ( 24.46 by residue)
QMean score : 0.128
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