Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFT-------------------KYIDKSTPNLMMACSSGKHYPQAKLT---IRKAGGENQVEYLIITLKE----------VLVSSVSTGGSGGEDRLT-----ENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA-------------- |
| 4FYM Chain:G ((9-260)) | EFLCDEEIYKSFVHLKDKICEERKKKELVSYSSYIKEMKKLLKVVLLKYKALKFRKSNYFFSSGVLNNIVSSNIICFLLSELILKNKLSFDYLLGASYKGIPMVSLTSHFLFESKKYSNIFYLYDRVIVGNLDDEKKNIIIIDDVFTCGTALTEILAKLKTYEHLKVVAFIVLLNRNEYEINENNQKIYFKDIFEKRVGIPLYSILSYKDDIQSMI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5555 for 996 contacts (-5.6/contact) +
2D Compatibility (PS) -16767 + (NN) -529 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 1000
Total energy: -32651.0 ( -32.78 by residue)
QMean score : 0.154
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