Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVY-VGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGY-KRDRNLGTYLSRSYEGRYVGGFLAAKMTRS---HKIGYIASFPIPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALIDQGVDVVFQH--TDSPAPIQAAERRG-----VYAVGYASDMQHFGPKT-----VLTSIVNDWGPHYIRSAQAVMDGTWKS-EDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
2FQX Chain:A ((3-318)) | --------------------------------GDFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENN--AKCKYVTA-STDAEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGTGNGVIKEARDRRLNGQDVWVIGVDRDQYMDGVYDGSKSVVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGLEDKAVGIPEENPNLSSAVMEKIRSFEEKIVSKEIV--------------------------------VPVRSARMMN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FQX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146173 for 2695 contacts (-54.2/contact) +
2D Compatibility (PS) -32809 + (NN) -12290 + (LL) 5044
1D Compatibility (HY) -14000 + (ID) 3350
Total energy: -203578.0 ( -75.54 by residue)
QMean score : 0.555
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