Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKT-ESVAPPEQKDPLVVS-IDGA-GKLFVN-KDEIQPELLESNLA-AAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
2R2C Chain:A ((36-180))
KSYKTWDVP--IAKINIFAVAEYTDTQKIKVTVKGKILEGN---TLPKSMVQVYLLEDKNHVLRGAVNGIWGEEFVNLKDYLYTYAVEPLSGMSFVAENYSIVAFVYDVQ------------TFEVYDVVHVKINPQS
General information:
TITO was launched using:
RESULT:
Template:
2R2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19172 for 740 contacts (-25.9/contact) +
2D Compatibility (PS) -11452 + (NN) 9057 + (LL) 1440
1D Compatibility (HY) -400 + (ID) 600
Total energy: -21127.0 ( -28.55 by residue)
QMean score : 0.064
(partial model without unconserved sides chains):
PDB file :
Tito_2R2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R2C-query.scw
PDB file :
Tito_Scwrl_2R2C.pdb
: