Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHPSHVRALCASLCLGAGLPVHAGHVHAGQGFLEDAKASLTARNFHLHRNFVGDA-SQGKAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSLK--LDGGKGTAGTQLLPIHDDGRPADDFGRLA-VAGKLRV--SNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQLSANEIAGLTLYAGQFRGNSPRNDASMQDMSLFGR--------PAATSDRFDFAGGEYRFNGERSLLGLWNAELKDIYRQQYLQLQHSQPLGD-WLLGANLGGFRGRDAGSARAGKLDNRTVSALFSARYGLHTLYLGLQKVSGDDGWMRVNGTSGGTLANDSYNASYDNPGERSWQLRYDFDFVGLGLPGLTFMTRYLHGDHVRLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDWGSNTRFDENRLIVSYPLSLL |
| 3T24 Chain:A ((6-401)) | -----------------------------QSEFIKDSKASIELRNFYFNRDFRQEGASQSKAEEWAQGFLLRYESGYTEGT--IGFGVDAIGLLGVKLDS---------------------QDDYGEAGITAKLRASKSTLKIGTLTPKLPVIMPNDSRLLPQTFQGGALNSMEIDGLTLDAGRLKKVNQRDSSDNEDMTITGGGKRQIVVRSGLTSDKFDFAGGSYKWTDNL-STSYHYGKLDNFYKQHYLGLVHTLPIADKQSLKSDIRWARSTDDGS---SNVDNKALNAMFTYSLGYHAFGVGYQKMSGDTGFAYINGAD-PYLVNFIQIGDFANKDEKSWQARYDYNFAGVGIPGLTFMTRYVKGDNIDLLTTSGEGKEWERDMDIAYVFQSGPLKNLGVKWRNATMRTNY--TNDYDENRLIVSYTLPLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T24.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32295 for 2776 contacts (11.6/contact) +
2D Compatibility (PS) -37036 + (NN) 786 + (LL) 1772
1D Compatibility (HY) -27600 + (ID) 7550
Total energy: -37333.0 ( -13.45 by residue)
QMean score : ?
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