Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDLAQNPPAVRTVLAGLMLSIFLSALDQTIVAVSLPAISADYADLDLLAWVISAYMVAMTVSM--PIYGKLGDLYGRRRLMLFAIV-------VFTAASLLCGLAQSMGQLVLARVLQGIGAGGLMAVSQAIIGDIVPPRERGRYQGYFSSMYAIASVAGPVLGGLLTEYLSWHWVFWINLPIGLLALAISRRTLVGLPVPRRQPVIDYLGIVLMVVGLTALLLAITQIGQGAAWSDPALLGLFALAALALLLFVAQERRFREPLVPMQLFAVRAATLSWLVAFFASF--QAISLTVLVPLRYQSVTGAGADSAALHLLPLVMGLPLGAYCCGRLTASLGRYKPLILLGAVLLPCGIAGLALVPVGDHWLSGLCMLLTGIAIGTQFPTSL-VAAQNAVEQRHIGVATSNATLFRSLGGAVGVALMSAILLALLKHLRIGGGLDQGFSESALLSSLDAASGPARVILQHVLADAFKVLFLVNAAVALLGLAVASALP---DMTLRGRGATQPTAGE-- |
5DA0 Chain:A ((14-484)) | --QREWFANPRKDVLAGIVVAL---ALIPEAIAFSIIA------GVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKLARYLKFVPRSVMVGFVNALAILIFMA-QLPQFVGANWQMYAMVAAGLAIIYLLPLVFKA--------MPSALVAIVVLTVVAVVTGADVKT--VGDMG-TLPTALPHFQFPQVPLTFETLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMIGQSMINVTSGGRGRLSTFVAGAFLMVLILAL-----------QPLLVQIPMAALVAVMMVVAISTFDWGSLRFPKGETVVMLATVAVTVFTHDLSLGVLIGVVLSALFFARKVSQLSQVTPVDEVDGT-----------RTYRVRGQL-FFVSTHDFLHQFDF-THPAR----RVVIDLSDAHFWDGSAVGALDKVMLKFMRQGTSVELRGLNAASATLVERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -415052 for 3767 contacts (-110.2/contact) +
2D Compatibility (PS) -46895 + (NN) -16320 + (LL) 5080
1D Compatibility (HY) -18400 + (ID) 4300
Total energy: -495887.0 ( -131.64 by residue)
QMean score : 0.256
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